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ALDH16A1

ALDH Gene Record


Summary for ALDH16A1
Trivial Names & Synonyms
Database Accession ID's
Molecular Features
Polymorphisms
Substrates and Kinetic Values
Tissue Expression & Cellular Localization
Reference List

ALDH16A1

Summary for ALDH16A1:

ALDH16A1 encodes for an enzyme that has yet to be characterized.

 
 

Trivial Names and Synonyms for ALDH16A1:

2410004H02Rik,    AI452234,    FLJ00209,    LOC361571 similar to RIKEN cDNA 2410004H02 (rat),    mFLJ00209,    MGC10204,    MGC124726 (rat),    MGC19339
 
 

Database Accession ID's for ALDH16A1:

Species Gene-related Accession ID's Transcript-related Accession ID's Protein-related Accession ID's
Homo sapiens
(Human)
Institute Database Accession No.
NCBICCDS12766.1
NCBIEntrez Gene126133
NCBIGenBankNC_000019
NCBIUniGene355398
HUGOHGNC28114
EBI, WTSIEnsembl - GeneViewENSG00000161618
Institute Database Accession No.
NCBIGenBankNM_153329
Institute Database Accession No.
NCBIAceViewALDH16A1andFLT3LG.aApr07, ALDH16A1andFLT3LG.kApr07, ALDH16A1andFLT3LG.cApr07, ALDH16A1andFLT3LG.qApr07
NCBIEntrez ProteinNP_699160
EBI, WTSIEnsembl - ProtViewENSP00000293350
EBI, WTSIEnsembl - TransViewENST00000293350
EBI, SIB, PIRUniProtQ86YF0, Q8IZ83, Q8IYL4
 
Species Gene-related Accession ID's Transcript-related Accession ID's Protein-related Accession ID's
Mus musculus
(House mouse)
Institute Database Accession No.
NCBIEntrez Gene69748
NCBIGenBankNC_000073
NCBIUniGene82139
JLMGI1916998
EBI, WTSIEnsembl - GeneViewENSMUSG00000007833
Institute Database Accession No.
NCBIGenBankNM_145954
EBI, WTSIEnsembl - TransViewENSMUST00000007977, ENSMUST00000107815
Institute Database Accession No.
NCBIEntrez ProteinNP_666066
EBI, WTSIEnsembl - ProtViewENSMUSP00000007977
EBI, WTSIEnsembl - TransViewENSMUSP00000103445
EBI, SIB, PIRUniProtQ571I9
 
Species Gene-related Accession ID's Transcript-related Accession ID's Protein-related Accession ID's
Rattus norvegicus
(Norway rat)
Institute Database Accession No.
NCBIEntrez Gene361571
NCBIGenBankNC_005100
NCBIUniGene44200
MCWRGD1566295
EBI, WTSIEnsembl - GeneViewENSRNOG00000020623
Institute Database Accession No.
NCBIGenBankNM_001033706
EBI, WTSIEnsembl - TransViewENSRNOT00000027992, ENSRNOT00000027917, ENSRNOT00000056286
Institute Database Accession No.
NCBIEntrez ProteinNP_001028878
EBI, WTSIEnsembl - ProtViewENSRNOP00000027992, ENSRNOP00000027917, ENSRNOP00000053126
 
 
 

Molecular Features for ALDH16A1:

Species  
Homo sapiens
(Human)
Chromosome Locus : 19 q 13.33 (+ strand)
 

 
ALDH16A1_v1     (Alternative Splice Variant 1) Number of Exons for ALDH16A1_v1 :   17 Click Here for Homo sapiens Transcript Sequences for Alternative Splice Variant 1
Click Here for Homo sapiens Peptide Sequences for Alternative Splice Variant 1
Transcript Length
(b.p.'s)
Peptide Translation Length
(a.a.'s)
M.W.
(Da)
Isoelectric Point Comments
ENST00000293350 2606 ENST00000293350 802 85128 6.77 Click Here for Graphical and Tabular Details

NM_153329 2627 NP_699160 802 85114 6.35 Click Here for Graphical and Tabular Details

SNP's : 4 single nucleotide polymorphism(s) identified

ALDH16A1andFLT3LG.aApr07 3233 ALDH16A1andFLT3LG.aApr07 802 85128 6.35 Click Here for Graphical and Tabular Details

 
 
ALDH16A1_v2     (Alternative Splice Variant 2) Number of Exons for ALDH16A1_v2 :   15 Click Here for Homo sapiens Transcript Sequences for Alternative Splice Variant 2
Click Here for Homo sapiens Peptide Sequences for Alternative Splice Variant 2
Transcript Length
(b.p.'s)
Peptide Translation Length
(a.a.'s)
M.W.
(Da)
Isoelectric Point Comments
ALDH16A1andFLT3LG.cApr07 3995 ALDH16A1andFLT3LG.cApr07 292 31601 10.36 Click Here for Graphical and Tabular Details

 
 
ALDH16A1_v3     (Alternative Splice Variant 3) Number of Exons for ALDH16A1_v3 :   9 Click Here for Homo sapiens Transcript Sequences for Alternative Splice Variant 3
Click Here for Homo sapiens Peptide Sequences for Alternative Splice Variant 3
Transcript Length
(b.p.'s)
Peptide Translation Length
(a.a.'s)
M.W.
(Da)
Isoelectric Point Comments
ALDH16A1andFLT3LG.kApr07 1033 ALDH16A1andFLT3LG.kApr07 217 24365 6.42 Click Here for Graphical and Tabular Details

 
 
ALDH16A1_v4     (Alternative Splice Variant 4) Number of Exons for ALDH16A1_v4 :   9 Click Here for Homo sapiens Transcript Sequences for Alternative Splice Variant 4
Click Here for Homo sapiens Peptide Sequences for Alternative Splice Variant 4
Transcript Length
(b.p.'s)
Peptide Translation Length
(a.a.'s)
M.W.
(Da)
Isoelectric Point Comments
ALDH16A1andFLT3LG.qApr07 1057 ALDH16A1andFLT3LG.qApr07 153 17290 9.3 Click Here for Graphical and Tabular Details

 
Species  
Mus musculus
(House mouse)
Chromosome Locus : 7 4 B (- strand)
 

 
ALDH16A1_v1     (Alternative Splice Variant 1) Number of Exons for ALDH16A1_v1 :   17 Click Here for Mus musculus Transcript Sequences for Alternative Splice Variant 1
Click Here for Mus musculus Peptide Sequences for Alternative Splice Variant 1
Transcript Length
(b.p.'s)
Peptide Translation Length
(a.a.'s)
M.W.
(Da)
Isoelectric Point Comments
ENSMUST00000007977 3500 ENSMUSP00000007977 802 84798 5.90 Click Here for Graphical and Tabular Details

NM_145954 2586 NP_666066 802 84798 5.90 Click Here for Graphical and Tabular Details

 
 
ALDH16A1_v2     (Alternative Splice Variant 2) Number of Exons for ALDH16A1_v2 :   16 Click Here for Mus musculus Transcript Sequences for Alternative Splice Variant 2
Click Here for Mus musculus Peptide Sequences for Alternative Splice Variant 2
Transcript Length
(b.p.'s)
Peptide Translation Length
(a.a.'s)
M.W.
(Da)
Isoelectric Point Comments
ENSMUST00000107815 2685 ENSMUSP00000103445 754 79489 6.20 Click Here for Graphical and Tabular Details

 
Species  
Rattus norvegicus
(Norway rat)
Chromosome Locus : 1 q 22 (- strand)
 

 
ALDH16A1_v1     (Alternative Splice Variant 1) Number of Exons for ALDH16A1_v1 :   17 Click Here for Rattus norvegicus Transcript Sequences for Alternative Splice Variant 1
Click Here for Rattus norvegicus Peptide Sequences for Alternative Splice Variant 1
Transcript Length
(b.p.'s)
Peptide Translation Length
(a.a.'s)
M.W.
(Da)
Isoelectric Point Comments
ENSRNOT00000027992 2582 ENSRNOP00000027992 802 85415 6.07 Click Here for Graphical and Tabular Details

NM_001033706 2591 NP_001028878 802 85415 5.77 Click Here for Graphical and Tabular Details

 
 
ALDH16A1_v2     (Alternative Splice Variant 2) Number of Exons for ALDH16A1_v2 :   8 Click Here for Rattus norvegicus Transcript Sequences for Alternative Splice Variant 2
Click Here for Rattus norvegicus Peptide Sequences for Alternative Splice Variant 2
Transcript Length
(b.p.'s)
Peptide Translation Length
(a.a.'s)
M.W.
(Da)
Isoelectric Point Comments
ENSRNOT00000027917 1451 ENSRNOP00000027917 327 37885 4.49 Click Here for Graphical and Tabular Details

Transcript : Transcript sequence does not align with the genomic DNA. The sequence in Exon 7 and 8 required manual alignment due to significant genomic anomalies (the genomic sequence is incomplete and a 4 base deletion exists).

Deletions : 4 base deletion(s) identified

 
 
ALDH16A1_v?     (Alternative Splice Variant Unknown or To Be Determined) Number of Exons : N/A Click Here for Rattus norvegicus Transcript Sequences for Unknown Variants
Click Here for Rattus norvegicus Peptide Sequences for Unknown Variants
Transcript Length
(b.p.'s)
Peptide Translation Length
(a.a.'s)
M.W.
(Da)
Isoelectric Point Comments
ENSRNOT00000056286 393 ENSRNOP00000053126 131 13572 9.29 Click Here for Graphical and Tabular Details

Transcript : Incomplete sequence. Lacks termination codon.

Peptide : Transcript sequence is incomplete. Lacks termination codon.

 
 
 

Polymorphisms for ALDH16A1:

Currently Under Development
 
 

Substrates, Inhibitors and Enzyme Kinetics for ALDH16A1:

 
 

Tissue Expression & Cellular Localization for ALDH16A1:

Currently Under Development
 
 

Reference List for ALDH16A1:

ALDH16A1 Year Authors Title Journal Pubmed ID
 
 

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